Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872038.1_cds_XP_016434655.1_30690
CDS Infomation

[gene=LOC107761015] [db_xref=GeneID:107761015] [protein=E3 ubiquitin-protein ligase RING1-like] [protein_id=XP_016434655.1] [location=45009..46037] [gbkey=CDS]
Sequence

ATGGATGGAAGAGGAGCATCAAGATATTGGTGTCATCAGTGTTCAAGGAGGGTGGACCCC
ACGTTGGAGGTGGAGTTAAAATGTCCCATTTGTCAACAAGGTTTTGTCGAGGAAATGGGA
TCAGAAACTGCCCTTGAAAATGATTTTGGAGGGTCTGACTCCGATCGGGCCCTATCACTT
TGGGCGCCAATCTTGTTAGGCATGATGAGCAATCCTCGTCGTCGCTCTAGGTTTAGGCAT
CATCTCGAATTTGATAGTGATGATGATGATGATCATACTCGTGAAGGTGGGGAGACAGAA
CTTGATCCTGAGCTGGCATCTATAATGAATAGGCGGAGGAGGAACTCCACCACTATTCTC
CAGCTCTTGCAAAGTATTCGAGCTGGAATGGAGAATGCTGACGGTGAAAATAGTAGGGAG
GCAGGTAGGGATGGCGAGGAGCGTGTGATACTTGTAAATCCATTCAATCAAACCATCATT
GTGCAGGGTTCTTATGATTCGGATAATAATGACCGACCCATTGGCTCATTGGGTGATTAT
TTCATTGGTCCTGGTTTAGACATGTTGCTGCAACATTTGGCTGAGAATGATCCGAATAGG
TATGGTACTCCACCAGCTCAAAAAGAGGTTGTAGAGGCGTTGCCCGCGGTGAAAATTGAT
GAGACGATGCAGTGTTCCGTGTGCTTGGAAGACTTTGAGATTGGGACTGAAGCCAAAGAG
ATGCCTTGTAAGCACAAGTTTCATAGCGGGTGTATCTTACCGTGGTTGGAGCTTCATAGT
ACCTGTCCAGTCTGTAGGCATCAGTTACCCTCTGATGAATCAAAAGTTGGGAATGTAACT
GATAACACAAATGCTGCTCAGAGTAGTGATACAAGGAATGAAAATGGTCGACGTTTTCCA
GTGTCGCTTCCATGGCCTTTGAGTGGTTTGTTTTCATCAGGTACCCAATCTAGTAATGGA
AATTCATCATCAACGACTACTTCTTCATCAGGAAATGCAAACTCAAATGCTCATATGCAT
GATGATTAG

Peptide Sequence

PEP ID

XP_016434655.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana tabacum]
Sequence

MDGRGASRYWCHQCSRRVDPTLEVELKCPICQQGFVEEMGSETALENDFGGSDSDRALSL
WAPILLGMMSNPRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNSTTIL
QLLQSIRAGMENADGENSREAGRDGEERVILVNPFNQTIIVQGSYDSDNNDRPIGSLGDY
FIGPGLDMLLQHLAENDPNRYGTPPAQKEVVEALPAVKIDETMQCSVCLEDFEIGTEAKE
MPCKHKFHSGCILPWLELHSTCPVCRHQLPSDESKVGNVTDNTNAAQSSDTRNENGRRFP
VSLPWPLSGLFSSGTQSSNGNSSSTTTSSSGNANSNAHMHDD

Transcript Sequence

Gene sequence data has not been registered.